If it would be helpful, I can upload the ame with the data and the ggplot2 code. In Preview, open the copy and reduce image size by 50 (or more), and double. So far, so far as I can see, this is the only graphic that was misrendered. You want to use the Knit HTMLoption for this lesson. What worries me, though, is that I now think that I have to visually check the rendering of all of the graphics in the pdf document. To knit in RStudio, click the Knitpull down button.
Each uses knitr hooks to specify the types of figures. I have found an awkward but effective work around by exporting the graphic from the knitr step and then importing the graphic to the knitr document. The html format uses bootstrap with some css to put stuff in the margin. So there is something awry in the generation of the plots in the knit to pdf step where the graphics are generated and stored for addition to the final pdf in the Latex step.
#Knitr to pdf shrink figure size download#
After the process has completed, download and save your new, compressed PDF to your computer. Wait a few moments for your file to completely compress. The plot generated within knitr is correct. Select the PDF file that you would like to compress, then upload it to the PDF size converter for compression. I also checked the data to be sure which of the two plots was correct. So it seems that that the data are not being pulled from the dataframe and processed correctly to create the pdf graphic stored and then pulled in by the Latex step. Interestingly, the two horizontal lines are correctly rendered in the pdf version. After you set all the options, just hit 'Apply' to start shrinking PDF file size. In this page, you can choose the size you want to shrink PDF from Low, Medium, High quality. Step 2: Shrink PDF File Size After uploading, click on the 'Tool' > 'Optimize PDF' button. height figure height in inches (1 inch 25. In the new window, just select the PDF file and click 'Open'. Wait for the upload and compression processes to complete. R Markdown documents with support for HTML, Word, PDF and PowerPoint documents. I can upload the two plots with geom_point() added if you want, but it is clear that what is affecting the lines also is affecting the points the same way. Select up to 20 PDF files from your computer or drag them to the drop area. So whatever is happening is affecting the plot of the points and the lines the same way. The points in both versions of the plot overlay the lines exactly. Cderv: I added geom_point() + to the ggplot function.
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